Pinboard (cshalizi) https://pinboard.in/u:cshalizi/public/ recent bookmarks from cshalizi Cultural extinction in evolutionary perspective | Evolutionary Human Sciences | Cambridge Core 2021-04-30T19:20:11+00:00 https://www.cambridge.org/core/journals/evolutionary-human-sciences/article/cultural-extinction-in-evolutionary-perspective/035F093515E2A445FCA0D78DA542075B cshalizi to:NB cultural_evolution phylogenetics cultural_transmission cultural_differences imperialism nationalism re:flynn_from_gellner https://pinboard.in/ https://pinboard.in/u:cshalizi/b:3dfce1372b89/ No universals in the cultural evolution of kinship terminology | Evolutionary Human Sciences | Cambridge Core 2020-12-16T19:49:47+00:00 https://www.cambridge.org/core/journals/evolutionary-human-sciences/article/no-universals-in-the-cultural-evolution-of-kinship-terminology/0BF406C9CFC182F9142749FDD0442471 cshalizi to:NB cultural_evolution kinship anthropology phylogenetics https://pinboard.in/ https://pinboard.in/u:cshalizi/b:008bb08b6e8a/ Inferring Phenotypic Trait Evolution on Large Trees With Many Incomplete Measurements: Journal of the American Statistical Association: Vol 0, No 0 2020-11-20T15:32:51+00:00 https://www.tandfonline.com/doi/full/10.1080/01621459.2020.1799812 cshalizi to:NB phylogenetics missing_data statistics evolutionary_biology https://pinboard.in/ https://pinboard.in/u:cshalizi/b:e56d48899371/ Algebraic Statistics in Practice: Applications to Networks | Annual Review of Statistics and Its Application 2020-11-19T20:04:23+00:00 https://www.annualreviews.org/doi/abs/10.1146/annurev-statistics-031017-100053 cshalizi to:NB statistics phylogenetics network_data_analysis graphical_models algebra petrovic.sonja uhler.caroline https://pinboard.in/ https://pinboard.in/u:cshalizi/b:a80cef74bdd5/ Evolutionary trees can’t reveal speciation and extinction rates 2020-07-15T15:05:41+00:00 https://www.nature.com/articles/d41586-020-01021-4 cshalizito:NB track_down_references evolutionary_biology phylogenetics identifiability partial_identification https://pinboard.in/ https://pinboard.in/u:cshalizi/b:26d0857af259/ Are Birds Dinosaurs? - Justin Erik Halldór Smith 2020-04-24T19:22:47+00:00 https://www.jehsmith.com/1/2020/02/are-birds-dinosaurs.html cshaliziontology dinosaurs birds phylogenetics https://pinboard.in/ https://pinboard.in/u:cshalizi/b:81963655d516/ Phylogenetic Comparative Methods and the Evolution of Multivariate Phenotypes | Annual Review of Ecology, Evolution, and Systematics 2019-11-09T23:36:35+00:00 https://www.annualreviews.org/doi/abs/10.1146/annurev-ecolsys-110218-024555 cshalizi to:NB phylogenetics statistics https://pinboard.in/ https://pinboard.in/u:cshalizi/b:11c1f9725286/ [1909.13754] Identifiability in Phylogenetics using Algebraic Matroids 2019-10-01T15:40:25+00:00 https://arxiv.org/abs/1909.13754 cshalizi to:NB identifiability phylogenetics algebra statistics https://pinboard.in/ https://pinboard.in/u:cshalizi/b:b73e464936f6/ Coevolution of landesque capital intensive agriculture and sociopolitical hierarchy | PNAS 2018-05-07T22:31:13+00:00 http://www.pnas.org/content/115/14/3628 cshalizi to:NB cultural_evolution inequality historical_materialism phylogenetics https://pinboard.in/ https://pinboard.in/u:cshalizi/b:f3029e99714c/ Renewing Felsenstein’s phylogenetic bootstrap in the era of big data | Nature 2018-05-07T17:06:07+00:00 https://www.nature.com/articles/s41586-018-0043-0 cshalizi to:NB statistics evolutionary_biology phylogenetics bootstrap https://pinboard.in/ https://pinboard.in/u:cshalizi/b:9d5bc113ba1d/ Evolutionary dynamics of language systems 2017-10-26T18:05:19+00:00 http://www.pnas.org/content/114/42/E8822.abstract cshalizi linguistics language_history cultural_evolution phylogenetics in_NB https://pinboard.in/ https://pinboard.in/u:cshalizi/b:9a0dbb967f03/ Phylogenetic approach to the evolution of color term systems 2016-12-07T14:25:57+00:00 http://www.pnas.org/content/113/48/13666.abstract cshalizi cultural_evolution phylogenetics linguistics in_NB https://pinboard.in/ https://pinboard.in/u:cshalizi/b:137dd17ffb51/ Critically evaluating the theory and performance of Bayesian analysis of macroevolutionary mixtures 2016-08-24T16:14:25+00:00 http://www.pnas.org/content/113/34/9569.abstract.html cshalizi to:NB phylogenetics statistics re:phil-of-bayes_paper https://pinboard.in/ https://pinboard.in/u:cshalizi/b:09df42e1a901/ Cultural Phylogenetics - Concepts and Applications | Larissa Mendoza Straffon | Springer 2016-03-01T13:20:43+00:00 http://www.springer.com/us/book/9783319259260 cshalizi books:noted archaeology cultural_evolution phylogenetics re:do-institutions-evolve in_NB downloaded https://pinboard.in/ https://pinboard.in/u:cshalizi/b:3fc128acdb23/ Inferring Learning Strategies from Cultural Frequency Data - Springer 2015-04-30T21:07:13+00:00 http://link.springer.com/chapter/10.1007%2F978-4-431-55363-2_7 cshalizi to:NB social_learning cultural_evolution statistics phylogenetics approximate_bayesian_computation to_read re:do-institutions-evolve https://pinboard.in/ https://pinboard.in/u:cshalizi/b:7d2e1bcec9cb/ Phylogenetic reconstruction of Bantu kinship challenges Main Sequence Theory of human social evolution 2014-12-17T15:35:42+00:00 http://www.pnas.org/content/111/49/17414.abstract.html?etoc cshalizi to:NB cultural_evolution anthropology phylogenetics https://pinboard.in/ https://pinboard.in/u:cshalizi/b:17340c654054/ Maximum likelihood inference of reticulate evolutionary histories 2014-11-22T15:17:01+00:00 http://www.pnas.org/content/111/46/16448.abstract.html cshalizi to:NB evolutionary_biology statistics phylogenetics https://pinboard.in/ https://pinboard.in/u:cshalizi/b:97b15ef20dd2/ [1310.0035] Identical inferences about correlated evolution arise from ancestral state reconstruction and independent contrasts 2013-10-11T23:06:15+00:00 http://arxiv.org/abs/1310.0035 cshalizi to:NB evolutionary_biology phylogenetics statistics inference_to_latent_objects https://pinboard.in/ https://pinboard.in/u:cshalizi/b:05345fcce51a/ Kingman : Uses of Exchangeability 2013-04-30T16:26:33+00:00 http://projecteuclid.org/DPubS?service=UI&version=1.0&verb=Display&handle=euclid.aop/1176995566 cshalizi stochastic_processes exchangeability martingales probability genetics phylogenetics in_NB https://pinboard.in/ https://pinboard.in/u:cshalizi/b:f97380424ab0/ Automated reconstruction of ancient languages using probabilistic models of sound change 2013-03-13T04:21:10+00:00 http://www.pnas.org/content/110/11/4224.abstract cshalizi to:NB linguistics language_history phylogenetics color_me_skeptical https://pinboard.in/ https://pinboard.in/u:cshalizi/b:fb97f2bfd97f/ [1302.6422] Nonparametric Estimation of Phylogenetic Tree Distributions 2013-03-06T15:43:46+00:00 http://arxiv.org/abs/1302.6422 cshalizi to:NB kernel_methods density_estimation phylogenetics statistics re:network_differences to_teach:undergrad-ADA https://pinboard.in/ https://pinboard.in/u:cshalizi/b:2cec2bcc6bdc/ Holmes : Bootstrapping Phylogenetic Trees: Theory and Methods 2013-01-20T18:17:47+00:00 http://projecteuclid.org/DPubS?service=UI&version=1.0&verb=Display&handle=euclid.ss/1063994979 cshalizi to:NB to_read bootstrap evolutionary_biology phylogenetics confidence_sets holmes.susan re:network_differences via:larry_wasserman https://pinboard.in/ https://pinboard.in/u:cshalizi/b:1f963a85f7f2/ [1212.3730] Function-Valued Traits in Evolution 2012-12-18T14:03:22+00:00 http://arxiv.org/abs/1212.3730 cshalizi to:NB statistics evolutionary_biology phylogenetics functional_data_analysis https://pinboard.in/ https://pinboard.in/u:cshalizi/b:45436ac22552/ [1206.3520] Recovering the tree-like trend of evolution despite extensive lateral genetic transfer: A probabilistic analysis 2012-07-09T03:44:46+00:00 http://arxiv.org/abs/1206.3520 cshalizi to:NB phylogenetics statistics https://pinboard.in/ https://pinboard.in/u:cshalizi/b:b602ce6d32ff/ [0804.3166] Analysis of comparative data with hierarchical autocorrelation 2012-06-10T22:16:01+00:00 http://arxiv.org/abs/0804.3166 cshalizi to:NB statistics structured_data estimation phylogenetics re:critique_of_diffusion https://pinboard.in/ https://pinboard.in/u:cshalizi/b:00f3625e0168/ The Evolution of Cultural Diversity: A Phylogenetic Approach by Ruth Mace - Powell's Books 2012-02-05T17:31:42+00:00 http://www.powells.com/biblio/61-9781598742169-1 cshalizi books:noted phylogenetics evolutionary_biology human_evolution cultural_evolution cultural_transmission cultural_differences in_NB https://pinboard.in/ https://pinboard.in/u:cshalizi/b:ca18c82b51b9/ Phylogenetic Networks - Academic and Professional Books - Cambridge University Press 2012-02-05T14:51:02+00:00 http://www.cambridge.org/us/knowledge/isbn/item5696943/?site_locale=en_US cshalizi phylogenetics network_data_analysis evolutionary_biology cultural_evolution books:noted in_NB https://pinboard.in/ https://pinboard.in/u:cshalizi/b:47bb604c2d7d/