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    <dc:creator>arthegall</dc:creator><description><![CDATA[special indices (including bitmap indices!) for individual-oriented (as opposed to position-oriented) queries.]]></description>
<dc:subject>gentoypes language query github opensource aaron-quinlan genomics</dc:subject>
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    <dc:date>2015-01-07T15:57:15+00:00</dc:date>
    <link>https://github.com/kuujo/copycat</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Implementation of Raft in java.]]></description>
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]]></description>
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<item rdf:about="http://prediction.io/">
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<item rdf:about="http://sourceforge.net/projects/hadoop-bam/">
    <title>Hadoop-BAM | Free Science &amp; Engineering software downloads at SourceForge.net</title>
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    <link>http://sourceforge.net/projects/hadoop-bam/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[JARs checked into a repository, nested source directories... c'mon folks, this just looks sloppy.]]></description>
<dc:subject>hadoop bams bioinformatics software opensource git</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:93e1251ee818/</dc:identifier>
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	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:bioinformatics"/>
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	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:git"/>
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</item>
<item rdf:about="https://github.com/shaih/HElib">
    <title>shaih/HElib</title>
    <dc:date>2013-10-01T10:41:16+00:00</dc:date>
    <link>https://github.com/shaih/HElib</link>
    <dc:creator>arthegall</dc:creator><dc:subject>homomorphic-encryption cryptography code git opensource security via:jasoncal</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:a03980dab7c8/</dc:identifier>
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	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:cryptography"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:code"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:git"/>
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	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:security"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:via:jasoncal"/>
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</item>
<item rdf:about="https://github.com/Parquet">
    <title>Parquet (parquet)</title>
    <dc:date>2013-09-25T10:37:32+00:00</dc:date>
    <link>https://github.com/Parquet</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Columnar file format for Hadoop. ]]></description>
<dc:subject>avro hadoop via:jeff-hammerbacher column-store databases data github code opensource</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:05cf7dc11192/</dc:identifier>
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	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:column-store"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:databases"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:data"/>
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</item>
<item rdf:about="https://github.com/atduskgreg/opencv-processing-book">
    <title>atduskgreg/opencv-processing-book</title>
    <dc:date>2013-09-01T21:35:21+00:00</dc:date>
    <link>https://github.com/atduskgreg/opencv-processing-book</link>
    <dc:creator>arthegall</dc:creator><dc:subject>opencv tutorial book github opensource processing</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:b9b3449ee411/</dc:identifier>
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</item>
<item rdf:about="https://code.google.com/p/cofoja/">
    <title>cofoja - Contracts for Java - Google Project Hosting</title>
    <dc:date>2013-08-13T11:16:27+00:00</dc:date>
    <link>https://code.google.com/p/cofoja/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Java annotations for pre- and post-condition assertions during testing.  Used pretty extensively in the GATK.]]></description>
<dc:subject>work java programming testing library google-code opensource</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:1c87a0d890f4/</dc:identifier>
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	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:testing"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:library"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:google-code"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
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</item>
<item rdf:about="https://github.com/puffnfresh/roy/blob/master/src/typeinference.js">
    <title>roy/src/typeinference.js at master · puffnfresh/roy</title>
    <dc:date>2013-06-28T14:44:01+00:00</dc:date>
    <link>https://github.com/puffnfresh/roy/blob/master/src/typeinference.js</link>
    <dc:creator>arthegall</dc:creator><dc:subject>type-inference implementation javascript saving github opensource</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:59e3708c9efe/</dc:identifier>
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	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:implementation"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:javascript"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:saving"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:github"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
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</item>
<item rdf:about="https://github.com/mapmeld/majurojs">
    <title>mapmeld/majurojs · GitHub</title>
    <dc:date>2013-01-04T19:03:24+00:00</dc:date>
    <link>https://github.com/mapmeld/majurojs</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA["Majuro.js is an open data platform. In each city, users select a neighborhood or draw a custom area to extract buildings. They then can color-code, annotate, and describe each building, before creating a static site by forking the repo and adding their JSON data through Github's web interface."]]></description>
<dc:subject>mapping cities geography github opensource cartography web</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:a47238286398/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:mapping"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:cities"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:geography"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:github"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:cartography"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:web"/>
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</item>
<item rdf:about="https://github.com/openplans/OpenTripPlanner/wiki">
    <title>Home · openplans/OpenTripPlanner Wiki</title>
    <dc:date>2013-01-02T21:41:51+00:00</dc:date>
    <link>https://github.com/openplans/OpenTripPlanner/wiki</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Oh, very cool.]]></description>
<dc:subject>graphs trip-planning routing cities maps geography github opensource</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:01a7e5548da8/</dc:identifier>
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	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:trip-planning"/>
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	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:cities"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:maps"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:geography"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:github"/>
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</item>
<item rdf:about="https://01.org/graphbuilder/">
    <title>Home | GraphBuilder</title>
    <dc:date>2012-12-21T20:09:58+00:00</dc:date>
    <link>https://01.org/graphbuilder/</link>
    <dc:creator>arthegall</dc:creator><dc:subject>graphs computation parallel-computing hadoop intel opensource data</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:1827d395898d/</dc:identifier>
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	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:parallel-computing"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:hadoop"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:intel"/>
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	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:data"/>
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</item>
<item rdf:about="http://www.bunniestudios.com/blog/?p=2686">
    <title>Building my Own Laptop « bunnie's blog</title>
    <dc:date>2012-12-18T10:51:07+00:00</dc:date>
    <link>http://www.bunniestudios.com/blog/?p=2686</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[What's most interesting to me in this whole post, actually, are all the people in the comments, "I'd totally Kickstart this," and "Have you heard of a little thing called Kickstarter?"  Which is completely misunderstanding the concept: Kickstarter != Etsy, folks.  This all reminds me about one of Felix Salmon's earliest comments on Kickstarter ( http://blogs.reuters.com/felix-salmon/2012/03/12/kickstarters-mission-creep/ ), where he points out that it's just investment, but unregulated, unsecured, uncompensated... ]]></description>
<dc:subject>kickstarter engineering via:tjl bunnie-huang opensource missing-the-point</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:af761cd17d98/</dc:identifier>
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	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:missing-the-point"/>
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</item>
<item rdf:about="http://caseybergman.wordpress.com/2012/11/08/on-the-preservation-of-published-bioinformatics-code-on-github/#comment-859">
    <title>Christopher Hogue's comment on &quot;On the Preservation of Published Bioinformatics Code on Github&quot; (I wish you'd made me angry earlier)</title>
    <dc:date>2012-11-09T13:23:03+00:00</dc:date>
    <link>http://caseybergman.wordpress.com/2012/11/08/on-the-preservation-of-published-bioinformatics-code-on-github/#comment-859</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Via Jonathan Eisen on Twitter.

So I'm of two minds on this-- first, yeah, that is kind of shocking and depressing, and kudos to SourceForge for having preservation policies that are more resilient to these kinds of requests.  

Second, though, maybe both the commenter and the original poster have it wrong here: it doesn't really matter what either SourceForge or Github's policies are today, because those can always change.  Github can change their "forks of public repos aren't deleted" policy.  SourceForge can make it easier to delete existing respositories as well.  Ultimately this is all about bits, and the only way to make bits more reliably available is to ensure that there are lots of copies of those bits rather than focusing on the reliability of any one particular copy.  In that case, the winning system here is the one that makes copying faster and easier -- and for that, my money is on git rather than subversion, any day of the week. 

In other words, maybe it really *is* a question of technology, not policy.  ]]></description>
<dc:subject>technology copying digital-preservation opensource git subversion github source-forge via:jonathan-eisen</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
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</item>
<item rdf:about="https://github.com/wjosdejong/jsoneditoronline">
    <title>wjosdejong/jsoneditoronline</title>
    <dc:date>2012-10-29T01:56:12+00:00</dc:date>
    <link>https://github.com/wjosdejong/jsoneditoronline</link>
    <dc:creator>arthegall</dc:creator><dc:subject>json editor web programming github opensource</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:7b729c3d55fe/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:json"/>
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</item>
<item rdf:about="http://commoncrawl.org/">
    <title>CommonCrawl</title>
    <dc:date>2012-07-01T12:53:36+00:00</dc:date>
    <link>http://commoncrawl.org/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA["Common Crawl is a non-profit foundation dedicated to building and maintaining an open crawl of the web, thereby enabling a new wave of innovation, education, and research."  -- interesting.]]></description>
<dc:subject>web web-crawler dataset aws opensource</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:b5c53d05cb99/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:web"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:web-crawler"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:dataset"/>
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</item>
<item rdf:about="http://mallet.cs.umass.edu/index.php">
    <title>MALLET homepage</title>
    <dc:date>2012-06-19T17:38:19+00:00</dc:date>
    <link>http://mallet.cs.umass.edu/index.php</link>
    <dc:creator>arthegall</dc:creator><dc:subject>nlp machinelearning java opensource</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:9ce5ab366665/</dc:identifier>
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	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:machinelearning"/>
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</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://xing.github.com/wysihtml5/">
    <title>wysihtml5 - A better approach to rich text editing</title>
    <dc:date>2012-06-04T12:58:21+00:00</dc:date>
    <link>http://xing.github.com/wysihtml5/</link>
    <dc:creator>arthegall</dc:creator><dc:subject>html html5 web editor javascript opensource github</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:6002cbc656ef/</dc:identifier>
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</item>
<item rdf:about="https://github.com/boyter/BATF">
    <title>boyter/BATF - GitHub</title>
    <dc:date>2011-12-31T13:44:22+00:00</dc:date>
    <link>https://github.com/boyter/BATF</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA["Big-Ass Text File" -- constantly-updated, versioned, infinitely (YKWIM)-sized text file.  Backed by mysql.]]></description>
<dc:subject>via:? editor opensource text writing</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:80fed28e0b6b/</dc:identifier>
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	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:text"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:writing"/>
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</item>
<item rdf:about="http://tmux.sourceforge.net/">
    <title>tmux</title>
    <dc:date>2011-12-16T13:13:57+00:00</dc:date>
    <link>http://tmux.sourceforge.net/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Opensource alternative to 'screen'.]]></description>
<dc:subject>screen linux terminal utility opensource</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:c02c6fa52635/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:screen"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:linux"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:terminal"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:utility"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://www.rdkit.org/">
    <title>RDKit</title>
    <dc:date>2011-08-09T18:58:16+00:00</dc:date>
    <link>http://www.rdkit.org/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Whoa -- did *not* realize that Greg Landrum was (also) "The RDKit guy."  ]]></description>
<dc:subject>cheminformatics machinelearning greg-landrum software library python opensource</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:e70ee3f93f4d/</dc:identifier>
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	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:greg-landrum"/>
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	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:library"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:python"/>
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</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://tika.apache.org/">
    <title>Apache Tika - Apache Tika</title>
    <dc:date>2011-07-30T13:44:10+00:00</dc:date>
    <link>http://tika.apache.org/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Automated metadata extraction, integrated with Lucene and SOLR.]]></description>
<dc:subject>apache opensource metadata java lucene parsing</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:f7760eb11612/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:apache"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:metadata"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:java"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:lucene"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:parsing"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://jcifs.samba.org/">
    <title>JCIFS</title>
    <dc:date>2011-07-18T21:41:45+00:00</dc:date>
    <link>http://jcifs.samba.org/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Does NTLM v2.  I wish we didn't have to, though.]]></description>
<dc:subject>ntlm authentication networking java samba library opensource lgpl</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:d6bd4c8d1f4f/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:ntlm"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:authentication"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:networking"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:java"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:samba"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:library"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:lgpl"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://www.aosabook.org/en/index.html">
    <title>The Architecture of Open Source Applications</title>
    <dc:date>2011-07-02T12:37:06+00:00</dc:date>
    <link>http://www.aosabook.org/en/index.html</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[And hey, Adam wrote chapter 13!  Nice! ]]></description>
<dc:subject>via:arsyed software engineering book opensource programming</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:72e0deeb60cf/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:via:arsyed"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:software"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:engineering"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:book"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:programming"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://tilemill.com/">
    <title>TileMill | Home</title>
    <dc:date>2011-06-30T20:05:10+00:00</dc:date>
    <link>http://tilemill.com/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Maybe a fun project to play with in the future... ]]></description>
<dc:subject>cartography mapping geography web javascript css opensource</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:f92e9e23d9d3/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:cartography"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:mapping"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:geography"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:web"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:javascript"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:css"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://haproxy.1wt.eu/">
    <title>HAProxy - The Reliable, High Performance TCP/HTTP Load Balancer</title>
    <dc:date>2011-04-29T10:56:11+00:00</dc:date>
    <link>http://haproxy.1wt.eu/</link>
    <dc:creator>arthegall</dc:creator><dc:subject>http proxy load-balancing performance web networking opensource</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:1570e855e5e1/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:http"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:proxy"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:load-balancing"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:performance"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:web"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:networking"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://www.ibm.com/developerworks/library/wa-lucene/">
    <title>Delve inside the Lucene indexing mechanism</title>
    <dc:date>2011-04-21T16:34:46+00:00</dc:date>
    <link>http://www.ibm.com/developerworks/library/wa-lucene/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Understanding some of the details of the lucene index has been on my to-do list for a while now...]]></description>
<dc:subject>lucene java ibm tutorial search text opensource tab-dump</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:3dc05a90a5a4/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:lucene"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:java"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:ibm"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:tutorial"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:search"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:text"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:tab-dump"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://www.osqa.net/">
    <title>OSQA | The Open Source Q&amp;A System</title>
    <dc:date>2011-04-17T13:41:14+00:00</dc:date>
    <link>http://www.osqa.net/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Django-based Question-and-answer site.  Stack-exchange-ey.]]></description>
<dc:subject>stack-exchange django opensource python web questions software collaboration</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:51c5ea899823/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:stack-exchange"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:django"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:python"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:web"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:questions"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:software"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:collaboration"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://siren.sindice.com/index.html">
    <title>SIREn: Semantic Information Retrieval Engine</title>
    <dc:date>2011-02-15T18:04:59+00:00</dc:date>
    <link>http://siren.sindice.com/index.html</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[" SIREn - Semantic Information Retrieval Engine - a Lucene plugin to overcome these shortcomings and efficiently index and query RDF, as well as any textual document with an arbitrary amount of metadata fields."]]></description>
<dc:subject>lucene rdf semanticweb apache opensource library search text indexing</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:8cbfaee39107/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:lucene"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:rdf"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:semanticweb"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:apache"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:library"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:search"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:text"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:indexing"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://jsontools.berlios.de/">
    <title>JSON Tools - Home</title>
    <dc:date>2011-02-15T13:06:05+00:00</dc:date>
    <link>http://jsontools.berlios.de/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[LGPL'ed Java tools for JSON, including a JSON Schema validator.  To compare with my own JSON schema validator project...]]></description>
<dc:subject>json javascript java programming library opensource lgpl</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:3663d3c5cf0f/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:json"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:javascript"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:java"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:programming"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:library"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:lgpl"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://code.google.com/p/elda/">
    <title>elda - Project Hosting on Google Code</title>
    <dc:date>2011-01-26T12:19:30+00:00</dc:date>
    <link>http://code.google.com/p/elda/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Linked-Data-in-Java.  The jury's still out (for me) on how useful this kind of thing is, but maybe it's a good idea to accumulate a few implementations. ]]></description>
<dc:subject>java linked-data google-code opensource library software</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:c92bbfbbb336/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:java"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:linked-data"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:google-code"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:library"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:software"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://podofo.sourceforge.net/about.html">
    <title>PoDoFo</title>
    <dc:date>2011-01-26T12:11:05+00:00</dc:date>
    <link>http://podofo.sourceforge.net/about.html</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Another PDF parsing and extraction library, this one in C++.]]></description>
<dc:subject>c++ pdfs parsing library software opensource</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:f32788f31f17/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:c++"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:pdfs"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:parsing"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:library"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:software"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://www.coin-or.org/">
    <title>COIN-OR</title>
    <dc:date>2011-01-26T12:10:27+00:00</dc:date>
    <link>http://www.coin-or.org/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Open source "industrial strength" linear and integer programming.]]></description>
<dc:subject>linear-programming integer-programming software tool opensource</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:ed2d15384c84/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:linear-programming"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:integer-programming"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:software"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:tool"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://openbabel.org/wiki/Main_Page">
    <title>Main Page - Open Babel</title>
    <dc:date>2011-01-20T16:44:55+00:00</dc:date>
    <link>http://openbabel.org/wiki/Main_Page</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA["Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It's an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas." -- Includes a parser/filter engine for SMARTS expressions.]]></description>
<dc:subject>smarts structure bioinformatics chemoinformatics chemistry software opensource molecular-modeling</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:7d6d63d62105/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:smarts"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:structure"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:bioinformatics"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:chemoinformatics"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:chemistry"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:software"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:molecular-modeling"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://saaientist.blogspot.com/2010/12/open-research-computation-new-journal.html">
    <title>Saaien Tist: Open Research Computation - a new journal from BioMedCentral</title>
    <dc:date>2010-12-22T12:36:56+00:00</dc:date>
    <link>http://saaientist.blogspot.com/2010/12/open-research-computation-new-journal.html</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Yet another "publish your bioinformatics code here" journal.]]></description>
<dc:subject>journal research bioinformatics opensource</dc:subject>
<dc:source>https://pinboard.in/</dc:source>
<dc:identifier>https://pinboard.in/u:arthegall/b:0fb1af23fa05/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:journal"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:research"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:bioinformatics"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://code.google.com/p/obro/">
    <title>obro - Project Hosting on Google Code</title>
    <dc:date>2010-11-23T17:03:18+00:00</dc:date>
    <link>http://code.google.com/p/obro/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[The google code site for the Ontology Broker project.
]]></description>
<dc:subject>ontologies ontology-broker work projects personal google-code opensource</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:2fc46ff4b635/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:ontologies"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:ontology-broker"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:work"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:projects"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:personal"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:google-code"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="https://github.com/pgbovine/CDE">
    <title>pgbovine's CDE at master - GitHub</title>
    <dc:date>2010-11-22T21:54:55+00:00</dc:date>
    <link>https://github.com/pgbovine/CDE</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[On Linux, observes the execution of a script or program and (in a fairly general way) builds a virtual environment (think: "like virtualenv, but not restricted to python") that can be packaged up and given to someone else, so that they can run the same code with the same dependencies. A research project, so caveat downloader. It's (of course) a really cool idea, and probably very useful, although poking through the code makes it seem like the "black magic quotient" is a little high.
]]></description>
<dc:subject>virtualization environment github opensource linux programming repeatability via:amitp</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:8a3a693f26b2/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:virtualization"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:environment"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:github"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:linux"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:programming"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:repeatability"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:via:amitp"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://s4.io/">
    <title>s4: distributed stream computing platform</title>
    <dc:date>2010-11-16T17:09:44+00:00</dc:date>
    <link>http://s4.io/</link>
    <dc:creator>arthegall</dc:creator><dc:subject>yahoo stream-programming java library opensource distributed-computing</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:2083b50d4aa7/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:yahoo"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:stream-programming"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:java"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:library"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:distributed-computing"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://code.google.com/p/python-graph/">
    <title>python-graph - Project Hosting on Google Code</title>
    <dc:date>2010-11-07T21:03:39+00:00</dc:date>
    <link>http://code.google.com/p/python-graph/</link>
    <dc:creator>arthegall</dc:creator><dc:subject>python programming library opensource software google-code</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:39474426bc85/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:python"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:programming"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:library"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:software"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:google-code"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://kenai.com/projects/macmultitouch">
    <title>Mac OS X Multitouch Event API — Project Kenai</title>
    <dc:date>2010-10-03T19:32:24+00:00</dc:date>
    <link>http://kenai.com/projects/macmultitouch</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Apache-licensed OS X library that lets you, via JNI, get access to finger motions on the trackpad in Java programs.
]]></description>
<dc:subject>multitouch mac os-x java programming library opensource apache-license ui</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:819a143f5478/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:multitouch"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:mac"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:os-x"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:java"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:programming"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:library"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:apache-license"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:ui"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://marc4j.tigris.org/">
    <title>marc4j.tigris.org</title>
    <dc:date>2010-09-22T12:45:19+00:00</dc:date>
    <link>http://marc4j.tigris.org/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Library for parsing MARC records in Java.
]]></description>
<dc:subject>java programming library opensource marc bibliographic-records</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:db0b1b214617/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:java"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:programming"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:library"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:marc"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:bibliographic-records"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://blipkit.org/">
    <title>Blip: Biomedical Logic Programming</title>
    <dc:date>2010-09-20T12:19:11+00:00</dc:date>
    <link>http://blipkit.org/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[A package from Chris Mungall... (Can I modify that hoary Greenspun quote about "sufficiently complicated systems" and Scheme interpreters here?  Something like, "any sufficiently complicated bioinformatics software system contains an ad hoc, informally-specified, bug-ridden, slow implementation of half of Prolog, Sparql, or a DL reasoner"... of course, it helps if you *start* with Prolog, as in this case. Not that any of this is a bad thing.  Maybe worthwhile thinking about how to generalize.)
]]></description>
<dc:subject>greenspun programming bioinformatics chris-mungall logic-programming prolog opensource</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:d23db75044aa/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:greenspun"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:programming"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:bioinformatics"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:chris-mungall"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:logic-programming"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:prolog"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://ant.apache.org/ivy/">
    <title>Apache Ivy</title>
    <dc:date>2010-09-15T17:15:08+00:00</dc:date>
    <link>http://ant.apache.org/ivy/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Dependency management, integrated with ant.
]]></description>
<dc:subject>ant build programming software ivy apache opensource</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:2a1134873515/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:ant"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:build"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:programming"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:software"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:ivy"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:apache"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://github.com/wavii/pfp">
    <title>wavii's pfp at master - GitHub</title>
    <dc:date>2010-09-08T19:18:43+00:00</dc:date>
    <link>http://github.com/wavii/pfp</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[pfp == "pretty fast parser." (== "like the Stanford NLP parser, but faster")  Now all I need is a JavaCC grammar for JavaCC grammars, and we'll be good to go, right?
]]></description>
<dc:subject>parsing grammar dynamic-programming software tool opensource nlp language</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:24c353b1cad4/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:parsing"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:grammar"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:dynamic-programming"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:software"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:tool"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:nlp"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:language"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://commons.apache.org/fileupload/?">
    <title>FileUpload - Home</title>
    <dc:date>2010-08-31T20:45:59+00:00</dc:date>
    <link>http://commons.apache.org/fileupload/?</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA["FileUpload parses HTTP requests which conform to RFC 1867, "Form-based File Upload in HTML"."
]]></description>
<dc:subject>apache programming java web forms opensource library</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:c0fc3877ec60/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:apache"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:programming"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:java"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:web"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:forms"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:library"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://rejava.sourceforge.net/">
    <title>reJ - Project homepage</title>
    <dc:date>2010-08-31T13:45:09+00:00</dc:date>
    <link>http://rejava.sourceforge.net/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[bytecode view and manipulation library for java.
]]></description>
<dc:subject>java reflection bytecode library opensource programming</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:181af89ed104/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:java"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:reflection"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:bytecode"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:library"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:programming"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://code.google.com/p/persistenturls/">
    <title>persistenturls - Project Hosting on Google Code</title>
    <dc:date>2010-08-29T15:33:01+00:00</dc:date>
    <link>http://code.google.com/p/persistenturls/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[PURL server.
]]></description>
<dc:subject>purl web url semanticweb software google-code opensource work via:alanr</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:125a1ace9077/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:purl"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:web"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:url"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:semanticweb"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:software"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:google-code"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:work"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:via:alanr"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://www.cleondris.ch/opensource/ssh2/">
    <title>Ganymed SSH-2 for Java</title>
    <dc:date>2010-08-16T16:43:29+00:00</dc:date>
    <link>http://www.cleondris.ch/opensource/ssh2/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA["Ganymed SSH-2 for Java is an open source library which implements the SSH-2 protocol in pure Java (tested on J2SE 1.4.2 and 5.0). It allows one to connect to SSH servers from within Java programs. It supports SSH sessions (remote command execution and shell access), local and remote port forwarding, local stream forwarding, X11 forwarding, SCP and SFTP. There are no dependencies on any JCE provider, as all crypto functionality is included."
]]></description>
<dc:subject>java scp ssh library bsd opensource networking cryptography</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:0475b447e3f8/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:java"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:scp"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:ssh"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:library"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:bsd"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:networking"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:cryptography"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://pipeline.corante.com/archives/2010/07/29/opensource_pharmaceutical_babble.php">
    <title>&quot;Open-Source Pharmaceutical Babble&quot; (In the Pipeline)</title>
    <dc:date>2010-07-29T14:52:42+00:00</dc:date>
    <link>http://pipeline.corante.com/archives/2010/07/29/opensource_pharmaceutical_babble.php</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA["And that's it; that's the payoff. We'll all just hop to it, enabling and facilitating, expanding and evolving, stimulating and focusing. None of those are concrete verbs suggesting real courses of action. Whenever you see someone slip into that sort of talk, you can be sure that (at the very least) they have difficulty communicating whatever specific ideas they have. Or (more likely) that they don't have any specific ideas to tell you about at all."
]]></description>
<dc:subject>opensource buzzwords pharmaceuticals research community web futurism science</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:c0d8ae290a06/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:buzzwords"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:pharmaceuticals"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:research"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:community"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:web"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:futurism"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:science"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://openscholar.harvard.edu/home">
    <title>openscholar</title>
    <dc:date>2010-07-29T14:25:05+00:00</dc:date>
    <link>http://openscholar.harvard.edu/home</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA["A full-featured web site-creation package solely for the academic community. Scholars create web sites in seconds and can easily manage everything themselves (for free)" -- yet another Drupal-based system for "community creation." (YADSCC.)
]]></description>
<dc:subject>drupal education academia research software web community cms opensource</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:ba8896091b78/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:drupal"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:education"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:academia"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:research"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:software"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:web"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:community"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:cms"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="https://ecf.nyed.uscourts.gov/cgi-bin/ShowIndex.pl">
    <title>Eastern District of New York - Live Database Version 4.0.3-U.S. District Court</title>
    <dc:date>2010-07-25T16:31:23+00:00</dc:date>
    <link>https://ecf.nyed.uscourts.gov/cgi-bin/ShowIndex.pl</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA["Please be aware that RECAP is "open-source" software, which can be freely obtained by anyone with Internet access and modified for benign or malicious purposes, such as facilitating unauthorized access to restricted documents or seeding the repository with falsified or spurious documents."  --- ZOMG, not freely obtainable on the interwebs!!1!  Noooo000ooo!!!
]]></description>
<dc:subject>via:carl-malamud recap pacer opensource legal idiocy</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:9ac5860f8fc6/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:via:carl-malamud"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:recap"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:pacer"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:legal"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:idiocy"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://markjaquith.wordpress.com/2010/07/17/why-wordpress-themes-are-derivative-of-wordpress/">
    <title>&quot;Why WordPress Themes are Derivative of WordPress&quot; (Mark on WordPress)</title>
    <dc:date>2010-07-23T14:58:01+00:00</dc:date>
    <link>http://markjaquith.wordpress.com/2010/07/17/why-wordpress-themes-are-derivative-of-wordpress/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[For all the sound and fury about this GPL-vs-Wordpress-plugin-author mess, why do I feel as if this sentence -- "If modules are designed to run linked together in a shared address space..." -- is actually the crux of the argument?  None of the other mess about "common language," or "uses an API," or "intended to work together," actually functions as a bright line.  To my eye, this is the only reasonable proposal that's actually been made for differentiating derivative vs. non-derivative software with different origins (no surprise that it's from the FSF, who ostensibly know what they're talking about) -- although technically, that's not the case here, since some of the Thesis code is actually copied from WP, meaning it's pretty clearly "derivative."  Now, given that it's the only reasonable proposal put forward, the next question is: Is this a distinction that's actually present in statutes or case law?  Or is this simply the desired reading of the FSF itself?
]]></description>
<dc:subject>gpl fsf opensource licensing web argument copyright software wordpress law license via:manuel</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:149da8431276/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:gpl"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:fsf"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:licensing"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:web"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:argument"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:copyright"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:software"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:wordpress"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:law"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:license"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:via:manuel"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://code.google.com/p/java-twitter/">
    <title>java-twitter - Project Hosting on Google Code</title>
    <dc:date>2010-07-21T17:09:21+00:00</dc:date>
    <link>http://code.google.com/p/java-twitter/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[For when I finally getting around to creating a command-line twitter client for myself, so I don't have to reload the stupid thing in Firefox all the time.
]]></description>
<dc:subject>twitter java api software library client programming google opensource</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:998eb1284894/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:twitter"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:java"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:api"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:software"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:library"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:client"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:programming"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:google"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://dspace.mit.edu/handle/1721.1/41550">
    <title>DSpace@MIT : OpenBlocks : an extendable framework for graphical block programming systems</title>
    <dc:date>2010-07-21T15:59:30+00:00</dc:date>
    <link>http://dspace.mit.edu/handle/1721.1/41550</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Via Alan.  To read.
]]></description>
<dc:subject>programming framework mit thesis opensource openblocks</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:95417055c8ef/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:programming"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:framework"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:mit"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:thesis"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:openblocks"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://gate.ac.uk/">
    <title>GATE.ac.uk - index.html</title>
    <dc:date>2010-07-20T17:42:47+00:00</dc:date>
    <link>http://gate.ac.uk/</link>
    <dc:creator>arthegall</dc:creator><dc:subject>text-mining java opensource language nlp tool software</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:d4f58931a7ba/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:text-mining"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:java"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:language"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:nlp"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:tool"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:software"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://openscad.org/">
    <title>OpenSCAD - The Programmers Solid 3D CAD Modeller</title>
    <dc:date>2010-06-25T15:55:46+00:00</dc:date>
    <link>http://openscad.org/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA["OpenSCAD is not an interactive modeller. Instead it is something like a 3D-compiler that reads in a script file that describes the object and renders the 3D model from this script file (see examples below). This gives you (the designer) full control over the modelling process and enables you to easily change any step in the modelling process or make designes that are defined by configurable parameters."
]]></description>
<dc:subject>via:ltu 3d software opensource graphics modeling visualization design cad</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:5d3a4f3c000e/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:via:ltu"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:3d"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:software"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:graphics"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:modeling"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:visualization"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:design"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:cad"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://code.google.com/p/logkext/">
    <title>logkext - Project Hosting on Google Code</title>
    <dc:date>2010-04-16T21:02:00+00:00</dc:date>
    <link>http://code.google.com/p/logkext/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Keylogger for OS X, as I muse more about that "log all your own keystrokes" idea.  Browsing this code (reduced C++ which abuses #defines in some weird ways) has helped me understand a little more about low-level OS X programming.  At the same time, I'm dead scared of installing something like this on my laptop without completely reviewing every inch of the code first.
]]></description>
<dc:subject>osx programming c++ opensource keystroke-logging apple keylogger</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:47809e1320ee/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:osx"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:programming"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:c++"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:keystroke-logging"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:apple"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:keylogger"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://code.google.com/p/guava-libraries/">
    <title>Guava: Google Core Libraries for Java 1.6</title>
    <dc:date>2010-01-05T12:04:50+00:00</dc:date>
    <link>http://code.google.com/p/guava-libraries/</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Includes, apparently, the Google Collections library.  Plus a bunch of other stuff, some of which I end up re-writing on any java system I use anyway.
]]></description>
<dc:subject>guava google java programming library opensource collections</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:895448630598/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:guava"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:google"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:java"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:programming"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:library"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:collections"/>
</rdf:Bag></taxo:topics>
</item>
<item rdf:about="http://netresearch.ics.uci.edu/kfujii/jpcap/doc/tutorial/index.html">
    <title>Jpcap Tutorial</title>
    <dc:date>2009-12-27T20:11:51+00:00</dc:date>
    <link>http://netresearch.ics.uci.edu/kfujii/jpcap/doc/tutorial/index.html</link>
    <dc:creator>arthegall</dc:creator><description><![CDATA[Jpcap is a java library for capturing (but also, more importantly, reading and writing previously-captured) packet-capture (pcap) dump files.
]]></description>
<dc:subject>library java software networking debugging opensource</dc:subject>
<dc:identifier>https://pinboard.in/u:arthegall/b:5e4211560802/</dc:identifier>
<taxo:topics><rdf:Bag>	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:library"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:java"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:software"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:networking"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:debugging"/>
	<rdf:li rdf:resource="https://pinboard.in/u:arthegall/t:opensource"/>
</rdf:Bag></taxo:topics>
</item>
</rdf:RDF>